Supervisory authorities

CNRS INSA de Lyon Université Lyon1

Our partners

Bayer CropScience


Home > Scientific productions


Agrawal GK, Pedreschi R, Barkla BJ, Bindschedler LV, Cramer R, Sarkar A, Renaut J, Job D, Rakwal R (2012), Translational plant proteomics: A perspective, Journal of Proteomics, vol. 75 pp.4588-4601 , doi: 10.1016/j.jprot.2012.03.055.

Agrawal GK, Sarkar A, Agrawal R, Ndimba BK, Tanou G, Dunn MJ, Kieselbach T, Cramer R, Wienkoop S, Chen S, Rafudeen MS, Deswal R, Barkla BJ, Weckwerth W, Heazlewood JL, Renaut J, Job D, Chakraborty N, Rakwal R (2012), Boosting the globalization of plant proteomics through INPPO: current developments and future prospects, Proteomics, vol. 12 pp.359-368 , doi: 10.1002/pmic.201290018.

Antal Z, Rascle C, Cimerman A, Viaud M, Billon-Grand G, Choquer M, Bruel C (2012), The Homeobox BcHOX8 Gene in Botrytis Cinerea Regulates Vegetative Growth and Morphology, PLoS ONE, vol. 7 , doi: 10.1371/journal.pone.0048134.

Arc E, Chibani K, Grappin P, Jullien M, Godin B, Cueff G, Valot B, Balliau T, Job D, Rajjou L (2012), Cold Stratification and Exogenous Nitrates Entail Similar Functional Proteome Adjustments during Arabidopsis Seed Dormancy Release, Journal of Proteome Research, vol. 11 pp.5418-5432 , doi: 10.1021/pr3006815.

Atlan D, Coupat-Goutaland B, Risler A, Reyrolle M, Souchon M, Briolay J, Jarraud S, Doublet P, Pelandakis M (2012), Micriamoeba tesseris nov. gen. nov. sp.: A New Taxon of Free-living Small-sized Amoebae Non-permissive to Virulent Legionellae, Protist, vol. 163 pp.888-902 , doi: 10.1016/j.protis.2012.04.006.

Billon-Grand G, Rascle C, Droux M, Rollins JA, Poussereau N (2012), pH modulation differs during sunflower cotyledon colonization by the two closely related necrotrophic fungi Botrytis cinerea and Sclerotinia sclerotiorum, Molecular Plant Pathology, vol. 13 pp.568-578 , doi: 10.1111/j.1364-3703.2011.00772.x.

Campillo T, Lavire C, Shams M, Pothier JF, Pulawaska J (2012), Detection and identification methods and new tests as developed and used in the framework of COST873 for bacteria pathogenic to stone fruits and nuts: Tumorigenic Agrobacterium spp., Journal of Plant Pathology, vol. 94 pp.S1.97-S1.104 , doi: 10.4454/jpp.v94i1sup.016.

Catusse J, Job C, Job D (2012), Proteomics Reveals A Potential Role of the Perisperm in Starch Remobilization During Sugarbeet Seed Germination, In Seed Development: OMICS Technologies toward Improvement of Seed Quality and Crop Yield, (Eds Agrawal GK & Rakwal R - Springer Netherlands) pp.27-41 , doi: Dordrecht.

Charkowski A, Blanco C, Condemine G, Expert D, Franza T, Hayes C, Hugouvieux-Cotte-Pattat N, Solanilla EL, Low D, Moleleki L, Pirhonen M, Pitman A, Perna N, Reverchon S, Rodríguez Palenzuela P, San Francisco M, Toth I, Tsuyumu S, van der Waals J, van der Wolf J, Van Gijsegem F, Yang CH, Yedidia I (2012), The Role of Secretion Systems and Small Molecules in Soft-Rot Enterobacteriaceae Pathogenicity, Annual Review of Phytopathology, vol. 50 pp.425-449 , doi: 10.1146/annurev-phyto-081211-173013.

Charpentier X, Polard P, Claverys JP (2012), Induction of competence for genetic transformation by antibiotics: convergent evolution of stress responses in distant bacterial species lacking SOS?, Current Opinion in Microbiology, vol. 15 pp.570-576 , doi: 10.1016/j.mib.2012.08.001.

Cherrad S, Girard V, Dieryckx C, Goncalves IR, Dupuy JW, Bonneu M, Rascle C, Job C, Job D, Vacher S, Poussereau N (2012), Proteomic analysis of proteins secreted by Botrytis cinerea in response to heavy metal toxicity, Metallomics, vol. 4 pp.835-846 , doi: 10.1039/C2MT20041D.

Costechareyre D, Balmand S, Condemine G, Rahbe Y (2012), Dickeya dadantii, a Plant Pathogenic Bacterium Producing Cyt-Like Entomotoxins, Causes Septicemia in the Pea Aphid Acyrthosiphon pisum, PLoS ONE, vol. 7 , doi: 10.1371/journal.pone.0030702.

Cotton P, Soulard A, Wesolowski-Louvel M, Lemaire M (2012), The SWI/SNF KlSnf2 Subunit Controls the Glucose Signaling Pathway To Coordinate Glycolysis and Glucose Transport in Kluyveromyces lactis, Eukaryotic Cell, vol. 11 pp.1382-1390 , doi: 10.1128/EC.00210-12.

Crepin A, Barbey C, Beury-Cirou A, Helias V, Taupin L, Reverchon S, Nasser W, Faure D, Dufour A, Orange N, Feuilloley M, Heurlier K, Burini JF, Latour X (2012), Quorum Sensing Signaling Molecules Produced by Reference and Emerging Soft-Rot Bacteria (Dickeya and Pectobacterium spp.), PLoS ONE, vol. 7 , doi: 10.1371/journal.pone.0035176.

Drogue B, Thomas P, Balvay L, Prigent-Combaret C, Dorel C (2012), Engineering adherent bacteria by creating a single synthetic curli operon, Journal of Visualized Experiments: JoVE, pp.e4176 , doi: 10.3791/4176.

Galland M, Job D, Rajjou L (2012), The seed proteome web portal, Frontiers in Plant Proteomics, vol. 3 , doi: 10.3389/fpls.2012.00098.

Galland M, Lounifi I, Cueff G, Baldy A, Morin H, Job D, Rajjou L (2012), A Role for “Omics” Technologies in Exploration of the Seed Nutritional Quality, In Seed Development: OMICS Technologies toward Improvement of Seed Quality and Crop Yield, (Eds Agrawal GK & Rakwal R - Springer Netherlands) pp.477-501 , doi: .

Gu S, Kelly G, Wang X, Frenkiel T, Shevchik VE, Pickersgill RW (2012), Solution Structure of Homology Region (HR) Domain of Type II Secretion System, Journal of Biological Chemistry, vol. 287 pp.9072-9080 , doi: 10.1074/jbc.M111.300624.

Gu S, Rehman S, Wang X, Shevchik VE, Pickersgill RW (2012), Structural and Functional Insights into the Pilotin-Secretin Complex of the Type II Secretion System, PLoS Pathog, vol. 8 , doi: 10.1371/journal.ppat.1002531.

Hassan S, Shevchik VE, Robert X, Hugouvieux-Cotte-Pattat N (2013), PelN Is a New Pectate Lyase of Dickeya dadantii with Unusual Characteristics, Journal of Bacteriology, vol. 195 pp.2197-2206 , doi: 10.1128/JB.02118-12.

Laubie B, Ohannessian A, Desjardin V, Germain P (2012), Methodology to Assess Silicone (Bio)Degradation and its Effects on Microbial Diversity, Journal of Polymers and the Environment, vol. 20 pp.1019-1026 , doi: 10.1007/s10924-012-0501-y.

Lepleux C, Turpault MP, Oger P, Frey-Klett P, Uroz S (2012), Correlation of the abundance of betaproteobacteria on mineral surfaces with mineral weathering in forest soils, Applied and Environmental Microbiology, vol. 78 pp.7114-7119 , doi: 10.1128/AEM.00996-12.

Louis VL, Despons L, Friedrich A, Martin T, Durrens P, Casaregola S, Neuveglise C, Fairhead C, Marck C, Cruz JA, Straub ML, Kugler V, Sacerdot C, Uzunov Z, Thierry A, Weiss S, Bleykasten C, Montigny JD, Jacques N, Jung P, Lemaire M, Mallet S, Morel G, Richard GF, Sarkar A, Savel G, Schacherer J, Seret ML, Talla E, Samson G, Jubin C, Poulain J, Vacherie B, Barbe V, Pelletier E, Sherman DJ, Westhof E, Weissenbach J, Baret PV, Wincker P, Gaillardin C, Dujon B, Souciet JL (2012), Pichia sorbitophila, an Interspecies Yeast Hybrid, Reveals Early Steps of Genome Resolution After Polyploidization, G3: Genes|Genomes|Genetics, vol. 2 pp.299-311 , doi: 10.1534/g3.111.000745.

Lucas S, Han J, Lapidus A, Cheng JF, Goodwin LA, Pitluck S, Peters L, Mikhailova N, Teshima H, Detter JC, Han C, Tapia R, Land M, Hauser L, Kyrpides NC, Ivanova N, Pagani I, Vannier P, Oger P, Bartlett DH, Noll KM, Woyke T, Jebbar M (2012), Complete genome sequence of the thermophilic, piezophilic, heterotrophic bacterium Marinitoga piezophila KA3, Journal of Bacteriology, vol. 194 pp.5974-5975 , doi: 10.1128/JB.01430-12.

Luquet E, Garner TWJ, Lena JP, Bruel C, Joly P, Lengagne T, Grolet O, Plenet S (2012), Genetic erosion in wild populations makes resistance to a pathogen more costly, Evolution; international journal of organic evolution, vol. 66 pp.1942-1952 , doi: 10.1111/j.1558-5646.2011.01570.x.

Minas IS, Tanou G, Belghazi M, Job D, Manganaris GA, Molassiotis A, Vasilakakis M (2012), Physiological and proteomic approaches to address the active role of ozone in kiwifruit post-harvest ripening, Journal of Experimental Botany, vol. 63 pp.2449-2464 , doi: 10.1093/jxb/err418.

Oger P (2012), Methanization of Fossil Fuel: A Possible Sustainable Future Energy Source for Mankind?, Fermentation Technology, vol. 01 , doi: 10.4172/2167-7972.1000e110.

Ouafa ZA, Reverchon S, Lautier T, Muskhelishvili G, Nasser W (2012), The nucleoid-associated proteins H-NS and FIS modulate the DNA supercoiling response of the pel genes, the major virulence factors in the plant pathogen bacterium Dickeya dadantii, Nucleic Acids Research, vol. 40 pp.4306-4319 , doi: 10.1093/nar/gks014.

Pigeot-Remy S, Simonet F, Atlan D, Lazzaroni JC, Guillard C (2012), Bactericidal efficiency and mode of action: A comparative study of photochemistry and photocatalysis, Water Research, vol. 46 pp.3208-3218 , doi: 10.1016/j.watres.2012.03.019.

Planamente S, Mondy S, Hommais F, Vigouroux A, Morera S, Faure D (2012), Structural basis for selective GABA binding in bacterial pathogens, Molecular Microbiology, vol. 86 pp.1085-1099 , doi: 10.1111/mmi.12043.

Prestel E, Regeard C, Andrews J, Oger P, DuBow MS (2012), A Novel Bacteriophage Morphotype with a Ribbon-like Structure at the Tail Extremity, Research Journal of Microbiology, vol. 7 pp.75-81 , doi: 10.3923/jm.2012.75.81.

Prigent-Combaret C, Zghidi-Abouzid O, Effantin G, Lejeune P, Reverchon S, Nasser W (2012), The nucleoid-associated protein Fis directly modulates the synthesis of cellulose, an essential component of pellicle–biofilms in the phytopathogenic bacterium Dickeya dadantii, Molecular Microbiology, vol. 86 pp.172-186 , doi: 10.1111/j.1365-2958.2012.08182.x.

Rajjou L, Duval M, Gallardo K, Catusse J, Bally J, Job C, Job D (2012), Seed Germination and Vigor, Annual Review of Plant Biology, vol. 63 pp.507-533 , doi: 10.1146/annurev-arplant-042811-105550.

Rondelet A, Condemine G (2012), SurA Is Involved in the Targeting to the Outer Membrane of a Tat Signal Sequence-Anchored Protein, Journal of Bacteriology, vol. 194 pp.6131-6142 , doi: 10.1128/JB.01419-12.

Shams M, Lavire C, Muller D, Vial L, Campillo T, Nesme X (2012), Rapid and efficient methods to isolate, type strains and determine species of Agrobacterium spp. in pure culture and complex environments, Biochemical Testing, Dr. Jose C. Jimenez-Lopez (Ed.) ISBN: 978-953-51-0249-6, pp.InTech, Available from: , doi: .

Tanou G, Filippou P, Belghazi M, Job D, Diamantidis G, Fotopoulos V, Molassiotis A (2012), Oxidative and nitrosative-based signaling and associated post-translational modifications orchestrate the acclimation of citrus plants to salinity stress, The Plant Journal, vol. 72 pp.585-599 , doi: 10.1111/j.1365-313X.2012.05100.x.

Uroz S, Oger P, Morin E, Frey-Klett P (2012), Distinct ectomycorrhizospheres share similar bacterial communities as revealed by pyrosequencing-based analysis of 16S rRNA genes, Applied and Environmental Microbiology, pp.AEM.06742-11 , doi: 10.1128/AEM.06742-11.

Varrault G, Rocher V, Bracmort G, Louis Y, Matar Z (2012), Vers une nouvelle methode de determination des metaux labiles dans les milieux aquatiques, Techniques Sciences Methodes, pp.56-66 , doi: 10.1051/tsm/201204056.

Vincent D, Kohler A, Claverol S, Solier E, Joets J, Gibon J, Lebrun MH, Plomion C, Martin F (2012), Secretome of the Free-living Mycelium from the Ectomycorrhizal Basidiomycete Laccaria bicolor, Journal of Proteome Research, vol. 11 pp.157-171 , doi: 10.1021/pr200895f.

Wang X, Pineau C, Gu S, Guschinskaya N, Pickersgill RW, Shevchik VE (2012), Cysteine Scanning Mutagenesis and Disulfide Mapping Analysis of Arrangement of GspC and GspD Protomers within the Type 2 Secretion System, Journal of Biological Chemistry, vol. 287 pp.19082-19093 , doi: 10.1074/jbc.M112.346338.