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2013

Agrawal GK, Sarkar A, Righetti PG, Pedreschi R, Carpentier S, Wang T, Barkla BJ, Kohli A, Ndimba BK, Bykova NV, Rampitsch C, Zolla L, Rafudeen MS, Cramer R, Bindschedler LV, Tsakirpaloglou N, Ndimba RJ, Farrant JM, Renaut J, Job D, Kikuchi S, Rakwal R (2013), A decade of plant proteomics and mass spectrometry: Translation of technical advancements to food security and safety issues, Mass Spectrometry Reviews, vol. 32 pp.335-365 , doi: 10.1002/mas.21365.

Agrawal GK, Job D, Kieselbach T, Barkla BJ, Chen S, Deswal R, Luthje S, Amalraj RS, Tanou G, Ndimba BK, Cramer R, Weckwerth W, Wienkoop S, Dunn MJ, Kim ST, Fukao Y, Yonekura M, Zolla L, Rohila JS, Waditee-Sirisattha R, Masi A, Wang T, Sarkar A, Agrawal R, Renaut J, Rakwal R (2013), INPPO Actions and Recognition as a Driving Force for Progress in Plant Proteomics: Change of Guard, INPPO Update, and Upcoming Activities, PROTEOMICS, vol. 13 pp.3093-3100 , doi: 10.1002/pmic.201370174.

Albert VA, Barbazuk WB, dePamphilis CW, Der JP, Leebens-Mack J, Ma H, Palmer JD, Rounsley S, Sankoff D, Schuster SC, Soltis DE, Soltis PS, Wessler SR, Wing RA, Albert VA, Ammiraju JSS, Barbazuk WB, Chamala S, Chanderbali AS, dePamphilis CW, Der JP, Determann R, Leebens-Mack J, Ma H, Ralph P, Rounsley S, Schuster SC, Soltis DE, Soltis PS, Talag J, Tomsho L, Walts B, Wanke S, Wing RA, Albert VA, Barbazuk WB, Chamala S, Chanderbali AS, Chang TH, Determann R, Lan T, Soltis DE, Soltis PS, Arikit S, Axtell MJ, Ayyampalayam S, Barbazuk WB, Burnette JM, Chamala S, Paoli ED, dePamphilis CW, Der JP, Estill JC, Farrell NP, Harkess A, Jiao Y, Leebens-Mack J, Liu K, Mei W, Meyers BC, Shahid S, Wafula E, Walts B, Wessler SR, Zhai J, Zhang X, Albert VA, Carretero-Paulet L, dePamphilis CW, Der JP, Jiao Y, Leebens-Mack J, Lyons E, Sankoff D, Tang H, Wafula E, Zheng C, Albert VA, Altman NS, Barbazuk WB, Carretero-Paulet L, dePamphilis CW, Der JP, Estill JC, Jiao Y, Leebens-Mack J, Liu K, Mei W, Wafula E, Altman NS, Arikit S, Axtell MJ, Chamala S, Chanderbali AS, Chen F, Chen JQ, Chiang V, Paoli ED, dePamphilis CW, Der JP, Determann R, Fogliani B, Guo C, Harholt J, Harkess A, Job C, Job D, Kim S, Kong H, Leebens-Mack J, Li G, Li L, Liu J, Ma H, Meyers BC, Park J, Qi X, Rajjou L, Burtet-Sarramegna V, Sederoff R, Shahid S, Soltis DE, Soltis PS, Sun YH, Ulvskov P, Villegente M, Xue JY, Yeh TF, Yu X, Zhai J, Acosta JJ, Albert VA, Barbazuk WB, Bruenn RA, Chamala S, Kochko A, dePamphilis CW, Der JP, Herrera-Estrella LR, Ibarra-Laclette E, Kirst M, Leebens-Mack J, Pissis SP, Poncet V, Schuster SC, Soltis DE, Soltis PS, Tomsho L (2013), The Amborella Genome and the Evolution of Flowering Plants, Science, vol. 342 , doi: 10.1126/science.1241089.

Battaglia E, Klaubauf S, Vallet J, Ribot C, Lebrun MH, de Vries RP (2013), Xlr1 is involved in the transcriptional control of the pentose catabolic pathway, but not hemi-cellulolytic enzymes in Magnaporthe oryzae, Fungal Genetics and Biology, vol. 57 pp.76-84 , doi: 10.1016/j.fgb.2013.06.005.

Buchrieser C, Charpentier X (2013), Induction of Competence for Natural Transformation in Legionella pneumophila and Exploitation for Mutant Construction, Methods in Molecular Biology, vol. 954 pp.183-195 , doi: 10.1007/978-1-62703-161-5_9.

Chaabna Z, Forey F, Reyrolle M, Jarraud S, Atlan D, Fontvieille D, Gilbert C (2013), Molecular diversity and high virulence of Legionella pneumophila strains isolated from biofilms developed within a warm spring of a thermal spa, BMC Microbiology, vol. 13 , doi: 10.1186/1471-2180-13-17.

Charaoui-Boukerzaza S, Hugouvieux-Cotte-Pattat N (2013), A family 3 glycosyl hydrolase of Dickeya dadantii 3937 is involved in the cleavage of aromatic glucosides, Microbiology, vol. 159 pp.2395-2404 , doi: 10.1099/mic.0.071407-0.

Costechareyre D, Chich JF, Strub JM, Rahbe Y, Condemine G (2013), Transcriptome of Dickeya dadantii Infecting Acyrthosiphon pisum Reveals a Strong Defense against Antimicrobial Peptides, PLoS ONE, vol. 8 , doi: 10.1371/journal.pone.0054118.

Deswal R, Gupta R, Dogra V, Singh R, Abat JK, Sarkar A, Mishra Y, Rai V, Sreenivasulu Y, Amalraj RS, Raorane M, Chaudhary RP, Kohli A, Giri AP, Chakraborty N, Zargar SM, Agrawal VP, Agrawal GK, Job D, Renaut J, Rakwal R (2013), Plant proteomics in India and Nepal: current status and challenges ahead, Physiology and molecular biology of plants: an international journal of functional plant biology, vol. 19 pp.461-477 , doi: 10.1007/s12298-013-0198-y.

El-Maarouf-Bouteau H, Meimoun P, Job D, Bailly C (2013), Role of protein and mRNA oxidation in seed dormancy and germination, Frontiers in Plant Proteomics, vol. 4 , doi: 10.3389/fpls.2013.00077.

Girard V, Dieryckx C, Job C, Job D (2013), Secretomes: The fungal strike force, PROTEOMICS, vol. 13 pp.597-608 , doi: 10.1002/pmic.201200282.

Gueguen E, Durand E, Zhang XY, d'Amalric Q, Journet L, Cascales E (2013), Expression of a Yersinia pseudotuberculosis Type VI Secretion System Is Responsive to Envelope Stresses through the OmpR Transcriptional Activator, PLoS ONE, vol. 8 , doi: 10.1371/journal.pone.0066615.

Gueguen E, Cascales E (2013), Promoter Swapping Unveils the Role of the Citrobacter rodentium CTS1 Type VI Secretion System in Interbacterial Competition, Applied and Environmental Microbiology, vol. 79 pp.32-38 , doi: 10.1128/AEM.02504-12.

Hassan S, Shevchik VE, Robert X, Hugouvieux-Cotte-Pattat N (2013), PelN Is a New Pectate Lyase of Dickeya dadantii with Unusual Characteristics, Journal of Bacteriology, vol. 195 pp.2197-2206 , doi: 10.1128/JB.02118-12.

Herault E, Reverchon S, Nasser W (2013), Role of the LysR-type transcriptional regulator PecT and DNA supercoiling in the thermoregulation of pel genes, the major virulence factors in Dickeya dadantii, Environmental Microbiology, pp.n/a-n/a , doi: 10.1111/1462-2920.12198.

Jbilou F, Joly C, Galland S, Belard L, Desjardin V, Bayard R, Dole P, Degraeve P (2013), Biodegradation study of plasticised corn flour/poly(butylene succinate-co-butylene adipate) blends, Polymer Testing, vol. 32 pp.1565-1575 , doi: 10.1016/j.polymertesting.2013.10.006.

Lallemand M, Login FH, Guschinskaya N, Pineau C, Effantin G, Robert X, Shevchik VE (2013), Dynamic Interplay between the Periplasmic and Transmembrane Domains of GspL and GspM in the Type II Secretion System, PLoS ONE, vol. 8 , doi: 10.1371/journal.pone.0079562.

Landraud P, Chuzeville S, Billon-Grand G, Poussereau N, Bruel C (2013), Adaptation to pH and Role of PacC in the Rice Blast Fungus Magnaporthe oryzae, PLoS ONE, vol. 8 , doi: 10.1371/journal.pone.0069236.

Laubie B, Bonnafous E, Desjardin V, Germain P, Fleury E (2013), Silicone-based surfactant degradation in aqueous media, The Science of the Total Environment, vol. 454-455 pp.199-205 , doi: 10.1016/j.scitotenv.2013.02.022.

Lounifi I, Arc E, Molassiotis A, Job D, Rajjou L, Tanou G (2013), Interplay between protein carbonylation and nitrosylation in plants, PROTEOMICS, vol. 13 pp.568-578 , doi: 10.1002/pmic.201200304.

Mesle M, Periot C, Dromart G, Oger P (2013), Biostimulation to identify microbial communities involved in methane generation in shallow, kerogen-rich shales, Journal of Applied Microbiology, vol. 114 pp.55-70 , doi: 10.1111/jam.12015.

Mesle M, Dromart G, Oger P (2013), Microbial methanogenesis in subsurface oil and coal, Research in Microbiology, vol. 164 pp.959-972 , doi: 10.1016/j.resmic.2013.07.004.

Morcx S, Kunz C, Choquer M, Assie S, Blondet E, Simond-Cote E, Gajek K, Chapeland-Leclerc F, Expert D, Soulie MC (2013), Disruption of Bcchs4, Bcchs6 or Bcchs7 chitin synthase genes in Botrytis cinerea and the essential role of class VI chitin synthase (Bcchs6), Fungal Genetics and Biology, vol. 52 pp.1-8 , doi: 10.1016/j.fgb.2012.11.011.

Nasser W, Dorel C, Wawrzyniak J, Van Gijsegem F, Groleau MC, Deziel E, Reverchon S (2013), Vfm a new quorum sensing system controls the virulence of Dickeya dadantii, Environmental Microbiology, vol. 15 pp.865-880 , doi: 10.1111/1462-2920.12049.

Oger PM, Cario A (2013), Adaptation of the membrane in Archaea, Biophysical Chemistry, vol. 183 pp.42-56 , doi: 10.1016/j.bpc.2013.06.020.

Planamente S, Mondy S, Hommais F, Vigouroux A, Morera S, Faure D (2012), Structural basis for selective GABA binding in bacterial pathogens, Molecular Microbiology, vol. 86 pp.1085-1099 , doi: 10.1111/mmi.12043.

Ray P, Girard V, Gault M, Job C, Bonneu M, Mandrand-Berthelot MA, Singh SS, Job D, Rodrigue A (2012), Pseudomonas putida KT2440 response to nickel or cobalt induced stress by quantitative proteomics, Metallomics, vol. 5 pp.68-79 , doi: 10.1039/C2MT20147J.

Rehman S, Gu S, Shevchik VE, Pickersgill RW (2013), Anatomy of secretin binding to the Dickeya dadantii type II secretion system pilotin, Acta Crystallographica Section D Biological Crystallography, vol. 69 pp.1381-1386 , doi: 10.1107/S0907444913007658.

Reverchon S, Nasser W (2013), Dickeya ecology, environment sensing and regulation of virulence programme, Environmental Microbiology Reports, vol. 5 pp.622-636 , doi: 10.1111/1758-2229.12073.

Risler A, Coupat-Goutaland B, Pelandakis M (2013), Genotyping and phylogenetic analysis of Acanthamoeba isolates associated with keratitis, Parasitology Research, vol. 112 pp.3807-3816 , doi: 10.1007/s00436-013-3572-3.

Rondelet A, Condemine G (2013), Type II secretion: the substrates that won’t go away, Research in Microbiology, vol. 164 pp.556-561 , doi: 10.1016/j.resmic.2013.03.005.

Thabet S, Weiss-Gayet M, Dappozze F, Cotton P, Guillard C (2013), Photocatalysis on yeast cells: Toward targets and mechanisms, Applied Catalysis B: Environmental, vol. 140–141 pp.169-178 , doi: 10.1016/j.apcatb.2013.03.037.

Yacoubi R, Job C, Belghazi M, Chaibi W, Job D (2013), Proteomic analysis of the enhancement of seed vigour in osmoprimed alfalfa seeds germinated under salinity stress, Seed Science Research, vol. 23 pp.99-110 , doi: 10.1017/S0960258513000093.