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2015

Albareda M, Rodrigue A, Brito B, Ruiz-Argueso T, Imperial J, Mandrand-Berthelot MA, Palacios J (2015), Rhizobium leguminosarum HupE is a highly-specific diffusion facilitator for nickel uptake, Metallomics, vol. 7 pp.691-701 , doi: 10.1039/C4MT00298A.

Arnaud O, Meyer S, Vallin E, Beslon G, Gandrillon O (2015), Temperature-induced variation in gene expression burst size in metazoan cells, BMC molecular biology, vol. 16 pp.20 , doi: 10.1186/s12867-015-0048-2.

Cairey-Remonnay A, Deffaud J, Wesolowski-Louvel M, Lemaire M, Soulard A (2015), Glycolysis controls plasma membrane glucose sensors to promote glucose signaling in yeasts, Molecular and Cellular Biology, vol. 35 pp.747-757 , doi: 10.1128/MCB.00515-14.

Cario A, Lormieres F, Xiang X, Oger P (2015), High hydrostatic pressure increases amino acid requirements in the piezo-hyperthermophilic archaeon Thermococcus barophilus, Research in Microbiology, vol. 166 pp.710-716 , doi: 10.1016/j.resmic.2015.07.004.

Cario A, Grossi V, Schaeffer P, Oger PM (2015), Membrane homeoviscous adaptation in the piezo-hyperthermophilic archaeon Thermococcus barophilus, Extreme Microbiology, pp.1152 , doi: 10.3389/fmicb.2015.01152.

Cario A, Mizgier A, Thiel A, Jebbar M, Oger PM (2015), Restoration of the di-myo-inositol-phosphate pathway in the piezo-hyperthermophilic archaeon Thermococcus barophilus, Biochimie, vol. 118 pp.286-293 , doi: 10.1016/j.biochi.2015.05.011.

Dequivre M, Diel B, Villard C, Sismeiro O, Durot M, Coppee JY, Nesme X, Vial L, Hommais F (2015), Small RNA Deep-Sequencing Analyses Reveal a New Regulator of Virulence in Agrobacterium fabrum C58, Molecular plant-microbe interactions: MPMI, vol. 28 pp.580-589 , doi: 10.1094/MPMI-12-14-0380-FI.

Dieryckx C, Gaudin V, Dupuy JW, Bonneu M, Girard V, Job D (2015), Beyond plant defense: insights on the potential of salicylic and methylsalicylic acid to contain growth of the phytopathogen Botrytis cinerea, Frontiers in Plant Science, vol. 6 , doi: 10.3389/fpls.2015.00859.

Dore J, Perraud M, Dieryckx C, Kohler A, Morin E, Henrissat B, Lindquist E, Zimmermann SD, Girard V, Kuo A, Grigoriev IV, Martin F, Marmeisse R, Gay G (2015), Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis, New Phytologist, vol. 208 pp.1169-1187 , doi: 10.1111/nph.13546.

Gaide N, Pelandakis M, Robveille C, Albaric O, Jouvion G, Souchon M, Risler A, Abadie J (2015), Necrotizing Meningoencephalitis in a Captive Black and White Ruffed Lemur (Varecia variegata variegata) Caused by Acanthamoeba T4 Genotype, Journal of Comparative Pathology, vol. 153 pp.231-235 , doi: 10.1016/j.jcpa.2015.07.005.

Gerganova V, Maurer S, Stoliar L, Japaridze A, Dietler G, Nasser W, Kutateladze T, Travers A, Muskhelishvili G (2015), Upstream binding of idling RNA polymerase modulates transcription initiation from a nearby promoter, The Journal of Biological Chemistry, vol. 290 pp.8095-8109 , doi: 10.1074/jbc.M114.628131.

Gogada R, Singh SS, Lunavat SK, Pamarthi MM, Rodrigue A, Vadivelu B, Phanithi PB, Gopala V, Apte SK (2015), Engineered Deinococcus radiodurans R1 with NiCoT genes for bioremoval of trace cobalt from spent decontamination solutions of nuclear power reactors, Applied Microbiology and Biotechnology, vol. 99 pp.9203-9213 , doi: 10.1007/s00253-015-6761-4.

Golanowska M, Galardini M, Bazzicalupo M, Hugouvieux-Cotte-Pattat N, Mengoni A, Potrykus M, Slawiak M, Lojkowska E (2015), Draft Genome Sequence of a Highly Virulent Strain of the Plant Pathogen Dickeya solani, IFB0099, Genome Announcements, vol. 3 , doi: 10.1128/genomeA.00109-15.

Haines S, Gautheron S, Nasser W, Renauld-Mongenie G (2015), Identification of Novel Components Influencing Colonization Factor Antigen I Expression in Enterotoxigenic Escherichia coli, PloS One, vol. 10 pp.e0141469 , doi: 10.1371/journal.pone.0141469.

Haines S, Arnaud-Barbe N, Poncet D, Reverchon S, Wawrzyniak J, Nasser W, Renauld-Mongenie G (2015), IscR Regulates Synthesis of Colonization Factor Antigen I Fimbriae in Response to Iron Starvation in Enterotoxigenic Escherichia coli, Journal of Bacteriology, vol. 197 pp.2896-2907 , doi: 10.1128/JB.00214-15.

Jebbar M, Franzetti B, Girard E, Oger P (2015), Microbial diversity and adaptation to high hydrostatic pressure in deep-sea hydrothermal vents prokaryotes, Extremophiles, vol. 19 pp.721-740 , doi: 10.1007/s00792-015-0760-3.

Jiang X, Sobetzko P, Nasser W, Reverchon S, Muskhelishvili G (2015), Chromosomal “Stress-Response” Domains Govern the Spatiotemporal Expression of the Bacterial Virulence Program, mBio, vol. 6 pp.e00353-15 , doi: 10.1128/mBio.00353-15.

Juan PA, Attaiech L, Charpentier X (2015), Natural transformation occurs independently of the essential actin-like MreB cytoskeleton in Legionella pneumophila, Scientific Reports, vol. 5 pp.16033 , doi: 10.1038/srep16033.

Kang HJ, Gilbert C, Badeaux F, Atlan D, LaPointe G (2015), A tyrosine phosphorylation switch controls the interaction between the transmembrane modulator protein Wzd and the tyrosine kinase Wze of Lactobacillus rhamnosus, BMC microbiology, vol. 15 pp.40 , doi: 10.1186/s12866-015-0371-2.

Kelloniemi J, Trouvelot S, Heloir MC, Simon A, Dalmais B, Frettinger P, Cimerman A, Fermaud M, Roudet J, Baulande S, Bruel C, Choquer M, Couvelard L, Duthieuw M, Ferrarini A, Flors V, Le Pecheur P, Loisel E, Morgant G, Poussereau N, Pradier JM, Rascle C, Trda L, Poinssot B, Viaud M (2015), Analysis of the Molecular Dialogue Between Gray Mold (Botrytis cinerea) and Grapevine (Vitis vinifera) Reveals a Clear Shift in Defense Mechanisms During Berry Ripening, Molecular plant-microbe interactions: MPMI, vol. 28 pp.1167-1180 , doi: 10.1094/MPMI-02-15-0039-R.

Loth K, Costechareyre D, Effantin G, Rahbe Y, Condemine G, Landon C, da Silva P (2015), New Cyt-like ?-endotoxins from Dickeya dadantii: structure and aphicidal activity, Scientific Reports, vol. 5 pp.8791 , doi: 10.1038/srep08791.

Luthje S, Renaut J, Job D, Hajduch M, Carpentier S, Sarkar A, Agrawal R, Dunn MJ, Rakwal R, Agrawal GK (2015), INPPO2014, First INPPO World Congress on "Plant Proteomics: Methodology to Biology"-A global platform for involving, gathering and disseminating knowledge, Proteomics, vol. 15 pp.1631-1637 , doi: 10.1002/pmic.201570084.

Mesle M, Dromart G, Haeseler F, Oger PM (2015), Classes of organic molecules targeted by a methanogenic microbial consortium grown on sedimentary rocks of various maturities, Microbiological Chemistry and Geomicrobiology, pp.589 , doi: 10.3389/fmicb.2015.00589.

Mesle M, Periot C, Dromart G, Oger P (2015), Methanogenic microbial community of the Eastern Paris Basin: Potential for energy production from organic-rich shales, International Journal of Coal Geology, vol. 149 pp.67-76 , doi: 10.1016/j.coal.2015.07.002.

Meyer S, Everaers R (2015), Inferring coarse-grain histone-DNA interaction potentials from high-resolution structures of the nucleosome, Journal of Physics. Condensed Matter: An Institute of Physics Journal, vol. 27 pp.064101 , doi: 10.1088/0953-8984/27/6/064101.

Naughtin M, Haftek-Terreau Z, Xavier J, Meyer S, Silvain M, Jaszczyszyn Y, Levy N, Miele V, Benleulmi MS, Ruff M, Parissi V, Vaillant C, Lavigne M (2015), DNA Physical Properties and Nucleosome Positions Are Major Determinants of HIV-1 Integrase Selectivity, PloS One, vol. 10 pp.e0129427 , doi: 10.1371/journal.pone.0129427.

Oliveira AP, Dimopoulos S, Busetto AG, Christen S, Dechant R, Falter L, Haghir Chehreghani M, Jozefczuk S, Ludwig C, Rudroff F, Schulz JC, Gonzalez A, Soulard A, Stracka D, Aebersold R, Buhmann JM, Hall MN, Peter M, Sauer U, Stelling J (2015), Inferring causal metabolic signals that regulate the dynamic TORC1-dependent transcriptome, Molecular Systems Biology, vol. 11 pp.802 , doi: 10.15252/msb.20145475.

Petit-Hartlein I, Rome K, de Rosny E, Molton F, Duboc C, Gueguen E, Rodrigue A, Coves J (2015), Biophysical and physiological characterization of ZraP from Escherichia coli, the periplasmic accessory protein of the atypical ZraSR two-component system, The Biochemical Journal, vol. 472 pp.205-216 , doi: 10.1042/BJ20150827.

Poncet V, Scutt C, Tournebize R, Villegente M, Cueff G, Rajjou L, Balliau T, Zivy M, Fogliani B, Job C, De Kochko A, Burtet-Sarramegna V, Job D (2015), The Amborella vacuolar processing enzyme family, Plant Proteomics, vol. 6 pp.618 , doi: 10.3389/fpls.2015.00618.

Repizo GD, Gagne S, Foucault-Grunenwald ML, Borges V, Charpentier X, Limansky AS, Gomes JãP, Viale AM, Salcedo SP (2015), Differential Role of the T6SS in Acinetobacter baumannii Virulence, PloS One, vol. 10 pp.e0138265 , doi: 10.1371/journal.pone.0138265.

Reverchon S, Sobetzko P, Nasser W, Muskhelishvili G (2015), Rethinking the Bacterial Genetic Regulation, Biochemistry & Analytical Biochemistry, vol. 4 , doi: 10.4172/2161-1009.1000193.

Saint-Macary ME, Barbisan C, Gagey MJ, Frelin O, Beffa R, Lebrun MH, Droux M (2015), Methionine biosynthesis is essential for infection in the rice blast fungus Magnaporthe oryzae, PloS One, vol. 10 pp.e0111108 , doi: 10.1371/journal.pone.0111108.

Uroz S, Oger P (2015), Draft Genome Sequence of Burkholderia sp. Strain PML1(12), an Ectomycorrhizosphere-Inhabiting Bacterium with Effective Mineral-Weathering Ability, Genome Announcements, vol. 3 pp.e00798-15 , doi: 10.1128/genomeA.00798-15.

Vannier P, Michoud G, Oger P, Marteinsson Vþ, Jebbar M (2015), Genome expression of Thermococcus barophilus and Thermococcus kodakarensis in response to different hydrostatic pressure conditions, Research in Microbiology, vol. 166 pp.717-725 , doi: 10.1016/j.resmic.2015.07.006.

Ansaldi M, Bazin I, Cholat P, Rodrigue A, Pignol D (2015), Toward inline multiplex biodetection of metals, bacteria, and toxins in water networks: the COMBITOX project, Environmental Science and Pollution Research, , doi: 10.1007/s11356-015-5582-4.

Cayron J, Prudent E, Escoffier C, Gueguen E, Mandrand-Berthelot MA, Pignol D, Garcia D, Rodrigue A (2015), Pushing the limits of nickel detection to nanomolar range using a set of engineered bioluminescent Escherichia coli, Environmental Science and Pollution Research, , doi: 10.1007/s11356-015-5580-6.