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Accueil > Équipes > Chromatine et Régulation de la Pathogénie bactérienne > Productions scientifiques

Chromatine et Régulation de la Pathogénie bactérienne

Arnaud O, Meyer S, Vallin E, Beslon G, Gandrillon O (2016), Erratum to : Temperature-induced variation in gene expression burst size in metazoan cells, BMC Mol Biol, vol. 17 pp.2 , doi: 10.1186/s12867-015-0054-4.

Baude J, Vial L, Villard C, Campillo T, Lavire C, Nesme X, Hommais F (2016), Coordinated Regulation of Species-Specific Hydroxycinnamic Acid Degradation and Siderophore Biosynthesis Pathways in Agrobacterium fabrum, Appl Environ Microbiol, vol. 82 pp.3515-24 , doi: 10.1128/AEM.00419-16.

Bouyioukos C, Reverchon S, Kepes F (2016), From multiple pathogenicity islands to a unique organized pathogenicity archipelago, Sci Rep, vol. 6 pp.27978 , doi: 10.1038/srep27978.

Duprey A, Nasser W, Leonard S, Brochier-Armanet C, Reverchon S (2016), Transcriptional start site turnover in the evolution of bacterial paralogous genes - the pelE-pelD virulence genes in Dickeya, FEBS J, , doi: 10.1111/febs.13921.

Duprey A, Muskhelishvili G, Reverchon S, Nasser W (2016), Temporal control of Dickeya dadantii main virulence gene expression by growth phase-dependent alteration of regulatory nucleoprotein complexes, Biochim Biophys Acta, vol. 1859 pp.1470-1480 , doi: 10.1016/j.bbagrm.2016.08.001.

Jiang X, Zghidi-Abouzid O, Oger-Desfeux C, Hommais F, Greliche N, Muskhelishvili G, Nasser W, Reverchon S (2016), Global transcriptional response of Dickeya dadantii to environmental stimuli relevant to the plant infection, Environ Microbiol, , doi: 10.1111/1462-2920.13267.

Leonard S, Hommais F, Nasser W, Reverchon S (2016), Plant-phytopathogen interactions : Bacterial responses to environmental and plant stimuli, Environ Microbiol, , doi: 10.1111/1462-2920.13611.

Nigatu D, Henkel W, Sobetzko P, Muskhelishvili G (2016), Relationship between digital information and thermodynamic stability in bacterial genomes, EURASIP J Bioinform Syst Biol, vol. 2016 pp.4 , doi: 10.1186/s13637-016-0037-x.

Ouattara HG, Reverchon S, Niamke SL, Nasser W (2017), Regulation of the synthesis of pulp degrading enzymes in Bacillus isolated from cocoa fermentation, Food Microbiology, vol. 63 pp.255-262 , doi: 10.1016/j.fm.2016.12.004.

Reverchon S, Muskhelisvili G, Nasser W (2016), Virulence Program of a Bacterial Plant Pathogen : The Dickeya Model, Prog Mol Biol Transl Sci, vol. 142 pp.51-92 , doi: 10.1016/bs.pmbts.2016.05.005.

Samagaci L, Ouattara H, Niamke S, Lemaire M (2016), Pichia kudrazevii and Candida nitrativorans are the most well-adapted and relevant yeast species fermenting cocoa in Agneby-Tiassa, a local Ivorian cocoa producing region, Food Research International, vol. 89 pp.773-780 , doi: 10.1016/j.foodres.2016.10.007.

Zghidi-Abouzid O, Herault E, Rimsky S, Reverchon S, Nasser W, Buckle M (2016), Regulation of pel genes, major virulence factors in the plant pathogen bacterium Dickeya dadantii, is mediated by cooperative binding of the nucleoid-associated protein H-NS, Res Microbiol, vol. 167 pp.247-53 , doi: 10.1016/j.resmic.2016.02.001.

Arnaud O, Meyer S, Vallin E, Beslon G, Gandrillon O (2015), Temperature-induced variation in gene expression burst size in metazoan cells, BMC molecular biology, vol. 16 pp.20 , doi: 10.1186/s12867-015-0048-2.

Dequivre M, Diel B, Villard C, Sismeiro O, Durot M, Coppee JY, Nesme X, Vial L, Hommais F (2015), Small RNA Deep-Sequencing Analyses Reveal a New Regulator of Virulence in Agrobacterium fabrum C58, Molecular plant-microbe interactions: MPMI, vol. 28 pp.580-589 , doi: 10.1094/MPMI-12-14-0380-FI.

Gerganova V, Maurer S, Stoliar L, Japaridze A, Dietler G, Nasser W, Kutateladze T, Travers A, Muskhelishvili G (2015), Upstream binding of idling RNA polymerase modulates transcription initiation from a nearby promoter, The Journal of Biological Chemistry, vol. 290 pp.8095-8109 , doi: 10.1074/jbc.M114.628131.

Haines S, Gautheron S, Nasser W, Renauld-Mongenie G (2015), Identification of Novel Components Influencing Colonization Factor Antigen I Expression in Enterotoxigenic Escherichia coli, PloS One, vol. 10 pp.e0141469 , doi: 10.1371/journal.pone.0141469.

Haines S, Arnaud-Barbe N, Poncet D, Reverchon S, Wawrzyniak J, Nasser W, Renauld-Mongenie G (2015), IscR Regulates Synthesis of Colonization Factor Antigen I Fimbriae in Response to Iron Starvation in Enterotoxigenic Escherichia coli, Journal of Bacteriology, vol. 197 pp.2896-2907 , doi: 10.1128/JB.00214-15.

Jiang X, Sobetzko P, Nasser W, Reverchon S, Muskhelishvili G (2015), Chromosomal “Stress-Response” Domains Govern the Spatiotemporal Expression of the Bacterial Virulence Program, mBio, vol. 6 pp.e00353-15 , doi: 10.1128/mBio.00353-15.

Meyer S, Everaers R (2015), Inferring coarse-grain histone-DNA interaction potentials from high-resolution structures of the nucleosome, Journal of Physics. Condensed Matter: An Institute of Physics Journal, vol. 27 pp.064101 , doi: 10.1088/0953-8984/27/6/064101.

Naughtin M, Haftek-Terreau Z, Xavier J, Meyer S, Silvain M, Jaszczyszyn Y, Levy N, Miele V, Benleulmi MS, Ruff M, Parissi V, Vaillant C, Lavigne M (2015), DNA Physical Properties and Nucleosome Positions Are Major Determinants of HIV-1 Integrase Selectivity, PloS One, vol. 10 pp.e0129427 , doi: 10.1371/journal.pone.0129427.

Reverchon S, Sobetzko P, Nasser W, Muskhelishvili G (2015), Rethinking the Bacterial Genetic Regulation, Biochemistry & Analytical Biochemistry, vol. 4 , doi: 10.4172/2161-1009.1000193.

Campillo T, Renoud S, Kerzaon I, Vial L, Baude J, Gaillard V, Bellvert F, Chamignon C, Comte G, Nesme X, Lavire C, Hommais F (2014), Analysis of hydroxycinnamic acid degradation in Agrobacterium fabrum reveals a coenzyme A-dependent, beta-oxidative deacetylation pathway, Applied and Environmental Microbiology, vol. 80 pp.3341-3349 , doi: 10.1128/AEM.00475-14.

Duprey A, Chansavang V, Fremion F, Gonthier C, Louis Y, Lejeune P, Springer F, Desjardin V, Rodrigue A, Dorel C (2014), “NiCo Buster” : engineering E. coli for fast and efficient capture of cobalt and nickel, Journal of Biological Engineering, vol. 8 pp.19 , doi: 10.1186/1754-1611-8-19.

Duprey A, Reverchon S, Nasser W (2014), Bacterial virulence and Fis : adapting regulatory networks to the host environment, Trends in Microbiology, vol. 22 pp.92-99 , doi: 10.1016/j.tim.2013.11.008.

Herault E, Reverchon S, Nasser W (2014), Role of the LysR-type transcriptional regulator PecT and DNA supercoiling in the thermoregulation of pel genes, the major virulence factors in Dickeya dadantii, Environmental Microbiology, vol. 16 pp.734-745 , doi: 10.1111/1462-2920.12198.

Herault E, Reverchon S, Nasser W (2013), Role of the LysR-type transcriptional regulator PecT and DNA supercoiling in the thermoregulation of pel genes, the major virulence factors in Dickeya dadantii, Environmental Microbiology, pp.n/a-n/a , doi: 10.1111/1462-2920.12198.

Nasser W, Dorel C, Wawrzyniak J, Van Gijsegem F, Groleau MC, Deziel E, Reverchon S (2013), Vfm a new quorum sensing system controls the virulence of Dickeya dadantii, Environmental Microbiology, vol. 15 pp.865-880 , doi: 10.1111/1462-2920.12049.

Planamente S, Mondy S, Hommais F, Vigouroux A, Morera S, Faure D (2012), Structural basis for selective GABA binding in bacterial pathogens, Molecular Microbiology, vol. 86 pp.1085-1099 , doi: 10.1111/mmi.12043.

Reverchon S, Nasser W (2013), Dickeya ecology, environment sensing and regulation of virulence programme, Environmental Microbiology Reports, vol. 5 pp.622-636 , doi: 10.1111/1758-2229.12073.

Campillo T, Lavire C, Shams M, Pothier JF, Pulawaska J (2012), Detection and identification methods and new tests as developed and used in the framework of COST873 for bacteria pathogenic to stone fruits and nuts : Tumorigenic Agrobacterium spp., Journal of Plant Pathology, vol. 94 pp.S1.97-S1.104 , doi: 10.4454/jpp.v94i1sup.016.

Charkowski A, Blanco C, Condemine G, Expert D, Franza T, Hayes C, Hugouvieux-Cotte-Pattat N, Solanilla EL, Low D, Moleleki L, Pirhonen M, Pitman A, Perna N, Reverchon S, Rodríguez Palenzuela P, San Francisco M, Toth I, Tsuyumu S, van der Waals J, van der Wolf J, Van Gijsegem F, Yang CH, Yedidia I (2012), The Role of Secretion Systems and Small Molecules in Soft-Rot Enterobacteriaceae Pathogenicity, Annual Review of Phytopathology, vol. 50 pp.425-449 , doi: 10.1146/annurev-phyto-081211-173013.

Crepin A, Barbey C, Beury-Cirou A, Helias V, Taupin L, Reverchon S, Nasser W, Faure D, Dufour A, Orange N, Feuilloley M, Heurlier K, Burini JF, Latour X (2012), Quorum Sensing Signaling Molecules Produced by Reference and Emerging Soft-Rot Bacteria (Dickeya and Pectobacterium spp.), PLoS ONE, vol. 7 , doi: 10.1371/journal.pone.0035176.

Ouafa ZA, Reverchon S, Lautier T, Muskhelishvili G, Nasser W (2012), The nucleoid-associated proteins H-NS and FIS modulate the DNA supercoiling response of the pel genes, the major virulence factors in the plant pathogen bacterium Dickeya dadantii, Nucleic Acids Research, vol. 40 pp.4306-4319 , doi: 10.1093/nar/gks014.

Planamente S, Mondy S, Hommais F, Vigouroux A, Morera S, Faure D (2012), Structural basis for selective GABA binding in bacterial pathogens, Molecular Microbiology, vol. 86 pp.1085-1099 , doi: 10.1111/mmi.12043.

Prigent-Combaret C, Zghidi-Abouzid O, Effantin G, Lejeune P, Reverchon S, Nasser W (2012), The nucleoid-associated protein Fis directly modulates the synthesis of cellulose, an essential component of pellicle–biofilms in the phytopathogenic bacterium Dickeya dadantii, Molecular Microbiology, vol. 86 pp.172-186 , doi: 10.1111/j.1365-2958.2012.08182.x.

Shams M, Lavire C, Muller D, Vial L, Campillo T, Nesme X (2012), Rapid and efficient methods to isolate, type strains and determine species of Agrobacterium spp. in pure culture and complex environments, Biochemical Testing, Dr. Jose C. Jimenez-Lopez (Ed.) ISBN: 978-953-51-0249-6, pp.InTech, Available from: , doi: .