Nos tutelles

CNRS INSA de Lyon Université Lyon1

Nos partenaires

Bayer CropScience


Accueil > Équipes > Adaptation aux milieux extrêmes > Production scientifique

Adaptation to Extreme Environments

Oger PM (2018), Complete Genome Sequences of 11 Type Species from the Thermococcus Genus of Hyperthermophilic and Piezophilic Archaea, Genome Announcements, vol. 6 , doi: 10.1128/genomeA.00037-18.

Wang Y, Zhang L, Zhu X, Li Y, Shi H, Oger P, Yang Z (2018), Biochemical characterization of a thermostable endonuclease V from the hyperthermophilic euryarchaeon Thermococcus barophilus Ch5, International Journal of Biological Macromolecules, vol. 117 pp.17-24 , doi: 10.1016/j.ijbiomac.2018.05.155.

Cadiou JL, Pichat S, Bondanese VP, Soulard A, Fujii T, Albarede F, Oger P (2017), Copper transporters are responsible for copper isotopic fractionation in eukaryotic cells, Scientific Reports, vol. 7 pp.44533 , doi: 10.1038/srep44533.

Lormieres F, Oger PM (2017), Epsilonproteobacteria dominate bacterial diversity at a natural tar seep, Comptes Rendus Biologies, vol. 340 pp.238-243 , doi: 10.1016/j.crvi.2016.10.001.

Uroz S, Oger P (2017), Caballeronia mineralivorans sp. nov., isolated from oak-Scleroderma citrinum mycorrhizosphere, Systematic and Applied Microbiology, vol. 40 pp.345-351 , doi: 10.1016/j.syapm.2017.05.005.

Uroz S, Oger PM (2017), Screening for N-AHSL-Based-Signaling Interfering Enzymes, Methods in Molecular Biology (Clifton, N.J.), vol. 1539 pp.271-286 , doi: 10.1007/978-1-4939-6691-2_18.

Albarede F, Telouk P, Balter V, Bondanese VP, Albalat E, Oger P, Bonaventura P, Miossec P, Fujii T (2016), Medical applications of Cu, Zn, and S isotope effects, Metallomics, vol. 8 pp.1056-1070 , doi: 10.1039/c5mt00316d.

Bondanese VP, Lamboux A, Simon M, Lafont JE, Albalat E, Pichat S, Vanacker JM, Telouk P, Balter V, Oger P, Albarede F (2016), Hypoxia induces copper stable isotope fractionation in hepatocellular carcinoma, in a HIF-independent manner, Metallomics, , doi: 10.1039/c6mt00102e.

Callac N, Oger P, Lesongeur F, Rattray JE, Vannier P, Michoud G, Beauverger M, Gayet N, Rouxel O, Jebbar M, Godfroy A (2016), Pyrococcus kukulkanii sp. nov., a hyperthermophilic, piezophilic archaeon isolated from a deep-sea hydrothermal vent, Int J Syst Evol Microbiol, vol. 66 pp.3142-9 , doi: 10.1099/ijsem.0.001160.

Cario A, Jebbar M, Thiel A, Kervarec N, Oger PM (2016), Molecular chaperone accumulation as a function of stress evidences adaptation to high hydrostatic pressure in the piezophilic archaeon Thermococcus barophilus, Sci Rep, vol. 6 pp.29483 , doi: 10.1038/srep29483.

Dalmasso C, Oger P, Courtine D, Georges M, Takai K, Maignien L, Alain K (2016), Complete Genome Sequence of the Hyperthermophilic and Piezophilic Archeon Thermococcus piezophilus CDGST, Able To Grow under Extreme Hydrostatic Pressures, Genome Announc, vol. 4 , doi: 10.1128/genomeA.00610-16.

Dalmasso C, Oger P, Selva G, Courtine D, L'Haridon S, Garlaschelli A, Roussel E, Miyazaki J, Reveillaud J, Jebbar M, Takai K, Maignien L, Alain K (2016), Thermococcus piezophilus sp. nov., a novel hyperthermophilic and piezophilic archaeon with a broad pressure range for growth, isolated from a deepest hydrothermal vent at the Mid-Cayman Rise, Syst Appl Microbiol, vol. 39 pp.440-444 , doi: 10.1016/j.syapm.2016.08.003.

Dalmasso C, Oger P, Courtine D, Georges M, Takai K, Maignien L, Alain K (2016), Erratum for Dalmasso et al., Complete Genome Sequence of the Hyperthermophilic and Piezophilic Archaeon Thermococcus piezophilus CDGS T , Able To Grow under Extreme Hydrostatic Pressures, Genome Announcements, vol. 4 pp.e01018-16 , doi: 10.1128/genomeA.01018-16.

Guschinskaya N, Brunel R, Tourte M, Lipscomb GL, Adams MW, Oger P, Charpentier X (2016), Random mutagenesis of the hyperthermophilic archaeon Pyrococcus furiosus using in vitro mariner transposition and natural transformation, Sci Rep, vol. 6 pp.36711 , doi: 10.1038/srep36711.

Martinez N, Michoud G, Cario A, Ollivier J, Franzetti B, Jebbar M, Oger P, Peters J (2016), High protein flexibility and reduced hydration water dynamics are key pressure adaptive strategies in prokaryotes, Sci Rep, vol. 6 pp.32816 , doi: 10.1038/srep32816.

Oger P, Sokolova TG, Kozhevnikova DA, Taranov EA, Vannier P, Lee HS, Kwon KK, Kang SG, Lee JH, Bonch-Osmolovskaya EA, Lebedinsky AV (2016), Complete Genome Sequence of the Hyperthermophilic and Piezophilic Archaeon Thermococcus barophilus Ch5, Capable of Growth at the Expense of Hydrogenogenesis from Carbon Monoxide and Formate, Genome Announc, vol. 4 , doi: 10.1128/genomeA.01534-15.

Uroz S, Oger P, Tisserand E, Cebron A, Turpault MP, Buee M, De Boer W, Leveau JH, Frey-Klett P (2016), Specific impacts of beech and Norway spruce on the structure and diversity of the rhizosphere and soil microbial communities, Sci Rep, vol. 6 pp.27756 , doi: 10.1038/srep27756.

Cario A, Lormieres F, Xiang X, Oger P (2015), High hydrostatic pressure increases amino acid requirements in the piezo-hyperthermophilic archaeon Thermococcus barophilus, Research in Microbiology, vol. 166 pp.710-716 , doi: 10.1016/j.resmic.2015.07.004.

Cario A, Grossi V, Schaeffer P, Oger PM (2015), Membrane homeoviscous adaptation in the piezo-hyperthermophilic archaeon Thermococcus barophilus, Extreme Microbiology, pp.1152 , doi: 10.3389/fmicb.2015.01152.

Cario A, Mizgier A, Thiel A, Jebbar M, Oger PM (2015), Restoration of the di-myo-inositol-phosphate pathway in the piezo-hyperthermophilic archaeon Thermococcus barophilus, Biochimie, vol. 118 pp.286-293 , doi: 10.1016/j.biochi.2015.05.011.

Jebbar M, Franzetti B, Girard E, Oger P (2015), Microbial diversity and adaptation to high hydrostatic pressure in deep-sea hydrothermal vents prokaryotes, Extremophiles, vol. 19 pp.721-740 , doi: 10.1007/s00792-015-0760-3.

Mesle M, Dromart G, Haeseler F, Oger PM (2015), Classes of organic molecules targeted by a methanogenic microbial consortium grown on sedimentary rocks of various maturities, Microbiological Chemistry and Geomicrobiology, pp.589 , doi: 10.3389/fmicb.2015.00589.

Mesle M, Periot C, Dromart G, Oger P (2015), Methanogenic microbial community of the Eastern Paris Basin : Potential for energy production from organic-rich shales, International Journal of Coal Geology, vol. 149 pp.67-76 , doi: 10.1016/j.coal.2015.07.002.

Uroz S, Oger P (2015), Draft Genome Sequence of Burkholderia sp. Strain PML1(12), an Ectomycorrhizosphere-Inhabiting Bacterium with Effective Mineral-Weathering Ability, Genome Announcements, vol. 3 pp.e00798-15 , doi: 10.1128/genomeA.00798-15.

Vannier P, Michoud G, Oger P, Marteinsson Vþ, Jebbar M (2015), Genome expression of Thermococcus barophilus and Thermococcus kodakarensis in response to different hydrostatic pressure conditions, Research in Microbiology, vol. 166 pp.717-725 , doi: 10.1016/j.resmic.2015.07.006.

Duprey A, Chansavang V, Fremion F, Gonthier C, Louis Y, Lejeune P, Springer F, Desjardin V, Rodrigue A, Dorel C (2014), “NiCo Buster” : engineering E. coli for fast and efficient capture of cobalt and nickel, Journal of Biological Engineering, vol. 8 pp.19 , doi: 10.1186/1754-1611-8-19.

Louis Y, Pernet-Coudrier B, Varrault G (2014), Implications of effluent organic matter and its hydrophilic fraction on zinc(II) complexation in rivers under strong urban pressure : aromaticity as an inaccurate indicator of DOM-metal binding, The Science of the Total Environment, vol. 490 pp.830-837 , doi: 10.1016/j.scitotenv.2014.04.123.

Oger P, Dorel C (2013), IGEM Europe 2013 : The genes and machines, Biofutur, pp.50-51 , doi: .

Oger P, Cario A (2014), [The high pressure life of piezophiles], Biologie Aujourd'hui, vol. 208 pp.193-206 , doi: 10.1051/jbio/2014023.

Ollivier B, Borgomano J, Oger P (2014), Petroleum : from formation to microbiology., Microbial life in the deep biosphere, pp.161-185 , doi: .

Peters J, Martinez N, Michoud G, Cario A, Franzetti B, Oger P, Jebbar M (2014), Deep Sea Microbes Probed by Incoherent Neutron Scattering Under High Hydrostatic Pressure, Zeitschrift fur Physikalische Chemie, vol. 228 , doi: 10.1515/zpch-2014-0547.

Jbilou F, Joly C, Galland S, Belard L, Desjardin V, Bayard R, Dole P, Degraeve P (2013), Biodegradation study of plasticised corn flour/poly(butylene succinate-co-butylene adipate) blends, Polymer Testing, vol. 32 pp.1565-1575 , doi: 10.1016/j.polymertesting.2013.10.006.

Laubie B, Bonnafous E, Desjardin V, Germain P, Fleury E (2013), Silicone-based surfactant degradation in aqueous media, The Science of the Total Environment, vol. 454-455 pp.199-205 , doi: 10.1016/j.scitotenv.2013.02.022.

Mesle M, Periot C, Dromart G, Oger P (2013), Biostimulation to identify microbial communities involved in methane generation in shallow, kerogen-rich shales, Journal of Applied Microbiology, vol. 114 pp.55-70 , doi: 10.1111/jam.12015.

Mesle M, Dromart G, Oger P (2013), Microbial methanogenesis in subsurface oil and coal, Research in Microbiology, vol. 164 pp.959-972 , doi: 10.1016/j.resmic.2013.07.004.

Nasser W, Dorel C, Wawrzyniak J, Van Gijsegem F, Groleau MC, Deziel E, Reverchon S (2013), Vfm a new quorum sensing system controls the virulence of Dickeya dadantii, Environmental Microbiology, vol. 15 pp.865-880 , doi: 10.1111/1462-2920.12049.

Oger PM, Cario A (2013), Adaptation of the membrane in Archaea, Biophysical Chemistry, vol. 183 pp.42-56 , doi: 10.1016/j.bpc.2013.06.020.

Drogue B, Thomas P, Balvay L, Prigent-Combaret C, Dorel C (2012), Engineering adherent bacteria by creating a single synthetic curli operon, Journal of Visualized Experiments: JoVE, pp.e4176 , doi: 10.3791/4176.

Laubie B, Ohannessian A, Desjardin V, Germain P (2012), Methodology to Assess Silicone (Bio)Degradation and its Effects on Microbial Diversity, Journal of Polymers and the Environment, vol. 20 pp.1019-1026 , doi: 10.1007/s10924-012-0501-y.

Lepleux C, Turpault MP, Oger P, Frey-Klett P, Uroz S (2012), Correlation of the abundance of betaproteobacteria on mineral surfaces with mineral weathering in forest soils, Applied and Environmental Microbiology, vol. 78 pp.7114-7119 , doi: 10.1128/AEM.00996-12.

Lucas S, Han J, Lapidus A, Cheng JF, Goodwin LA, Pitluck S, Peters L, Mikhailova N, Teshima H, Detter JC, Han C, Tapia R, Land M, Hauser L, Kyrpides NC, Ivanova N, Pagani I, Vannier P, Oger P, Bartlett DH, Noll KM, Woyke T, Jebbar M (2012), Complete genome sequence of the thermophilic, piezophilic, heterotrophic bacterium Marinitoga piezophila KA3, Journal of Bacteriology, vol. 194 pp.5974-5975 , doi: 10.1128/JB.01430-12.

Oger P (2012), Methanization of Fossil Fuel : A Possible Sustainable Future Energy Source for Mankind ?, Fermentation Technology, vol. 01 , doi: 10.4172/2167-7972.1000e110.

Prestel E, Regeard C, Andrews J, Oger P, DuBow MS (2012), A Novel Bacteriophage Morphotype with a Ribbon-like Structure at the Tail Extremity, Research Journal of Microbiology, vol. 7 pp.75-81 , doi: 10.3923/jm.2012.75.81.

Uroz S, Oger P, Morin E, Frey-Klett P (2012), Distinct ectomycorrhizospheres share similar bacterial communities as revealed by pyrosequencing-based analysis of 16S rRNA genes, Applied and Environmental Microbiology, pp.AEM.06742-11 , doi: 10.1128/AEM.06742-11.

Varrault G, Rocher V, Bracmort G, Louis Y, Matar Z (2012), Vers une nouvelle methode de determination des metaux labiles dans les milieux aquatiques, Techniques Sciences Methodes, pp.56-66 , doi: 10.1051/tsm/201204056.